京都大学化学研究所 生体機能化学研究系生体機能設計化学研究領域 今西研究室

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論文

2025年

  • Discovery and characterization of a high-affinity G-quadruplex binding peptide via mRNA display
    Naka Kudo Ida, Yoshimasa Kawaguchi, Shiroh Futaki, Miki Imanishi
    Bioorg. Med. Chem. (in press)
    doi: 10.1016/j.bmc.2025.118543
  • SARS-CoV-2 inhibition through mRNA delivery using engineered extracellular vesicles displaying the spike protein
    Yuna Nakagawa, Yoshimasa Kawaguchi, Hisaaki Hirose, Takao Hashiguchi, Joseph Lee, Akitsu Hotta, Jun Kawamoto, Michihito Sasaki, Hirofumi Sawa, Shiroh Futaki
    Biomaterials (in press)
    doi: 10.1016/j.biomaterials.2025.123594
  • Microcondensate-Mediated Intracellular Infusion of mRNA Across the Plasma Membrane
    Yoshimasa Kawaguchi, Ayumi Kikkawa, Seigo Kimura, Hiroshi Abe, Shiroh Futaki
    Angew. Chem. Int. Ed. 65(1):e12139 (2026)
    doi: 10.1002/anie.202512139
  • Structural Control of RNA Demethylation: G-Quadruplex Proximity Suppresses ALKBH5 Activity
    Keito Obata, Kamui Tanaka, Shiroh Futaki, Miki Imanishi
    Chem. Eur. J. 31(71):e01788 (2025)
    doi: 10.1002/chem.202501788
  • KCNN4 as a genomic determinant of cytosolic delivery by the attenuated cationic lytic peptide L17E
    Masashi Kuriyama, Hisaaki Hirose, Yoshimasa Kawaguchi, Junya Michibata, Masashi Maekawa, Shiroh Futaki
    Mol. Ther. 33(2), 595-614 (2025)
    DOI: 10.1016/j.ymthe.2024.12.050
  • Highly sequence-specific, timing-controllable m6 A demethylation by modulating RNA-binding affinity of m6 A erasers
    Kenko Otonari, Yuri Asami, Kosuke Ogata, Yasushi Ishihama, Shiroh Futaki, Miki Imanishi
    Chem.Commun. 61(1), 69-72 (2025)
    DOI: 10.1039/D4CC04070H
  • Polysaccharide-Based Coacervate Microgel Bearing Cationic Peptides That Achieve Dynamic Cell-Membrane Structure Alteration and Facile Cytosolic Infusion of IgGs
    Junya Michibata, Yoshimasa Kawaguchi, Hisaaki Hirose, Akiko Eguchi, Sayaka Deguchi, Kazuo Takayama, Wei Xu, Takuro Niidome, Yoshihiro Sasaki, Kazunari Akiyoshi, Shiroh Futaki
    Bioconjug. Chem. 35(12), 1888-1899 (2024)
    DOI: 10.1021/acs.bioconjchem.4c00344

2024年

  • An approach for the intracellular delivery of IgG via enzymatic ligation with a cell-permeable attenuated cationic amphiphilic lytic peptide
    Yoshimasa Kawaguchi, Sakahiro Terada, Shiroh Futaki
    Bioorg. Med. Chem. 111, 117835 (2024)
    DOI: 10.1016/j.bmc.2024.117835
  • E3MPH16: An efficient endosomolytic peptide for intracellular protein delivery
    Yoshimasa Kawaguchi, Yuki Kawamura, Hisaaki Hirose, Megumi Kiyokawa, Momo Hirate, Tsuyoshi Hirata, Yuriko Higuchi, Shiroh Futaki
    J. Control. Release 367, 877-891 (2024)
    DOI: 10.1016/j.jconrel.2024.01.067
  • Liquid droplet-mediated formulation of lipid nanoparticles encapsulating immunoglobulin G for cytosolic delivery
    Yusuke Hirai, Yoshimasa Kawaguchi, Chisato Kasahara, Hisaaki Hirose, Shiroh Futaki
    Mol. Pharmaceutics 21(4), 1653-1661 (2024)
    DOI: 10.1021/acs.molpharmaceut.3c00868
  • Light-controllable cell-membrane disturbance for intracellular delivery
    Wenting Huo, Koji Miki, Huiying Mu, Takashi Osawa, Harumi Yamaguma, Yuuya Kasahara, Satoshi Obika, Yoshimasa Kawaguchi, Hisaaki Hirose, Shiroh Futaki, Yusuke Miyazaki, Wataru Shinoda, Shuji Akai, Kouichi Ohe
    J. Mater. Chem. B 12(17), 4138-4147 (2024)
    DOI: 10.1039/D3TB02956E
  • Functional evaluation of an electrophilic focused library to identify a covalent inhibitor against intrinsically disordered circadian clock transcription factors
    Kazuya Yamanaka, Yoshihisa Inoue, Miki Imanishi, Junko Ohkanda
    Bioorg. Med. Chem. Lett. 98, 129588 (2024)
    DOI: 10.1016/j.bmcl.2023.129588

2023年

  • Xanthine Derivatives Inhibit FTO in an L-Ascorbic Acid-Dependent Manner
    Kamui Tanaka, Akiyo Suda, Motonari Uesugi, Shiroh Futaki, Miki Imanishi
    Chem. Commun. 59(72), 10809-10812 (2023)
    DOI: 10.1039/D3CC02484A
  • Inkjet-Based Intracellular Delivery System that Effectively Utilizes Cell-Penetrating Peptides for Cytosolic Introduction of Biomacromolecules through the Cell Membrane
    Mika Omura, Kenta Morimoto, Yurina Araki, Hisaaki Hirose, Yoshimasa Kawaguchi, Yukiya Kitayama, Yuto Goto, Atsushi Harada, Ikuo Fujii, Tomoka Takatani-Nakase, Shiroh Futaki, Ikuhiko Nakase
    ACS Appl. Mater. Interfaces 15(41), 47855–47865 (2023)
    DOI: 10.1021/acsami.3c01650
  • Structural Dissection of Epsin‐1 N‐Terminal Helical Peptide: The Role of Hydrophobic Residues in Modulating Membrane Curvature
    Motoki Nishimura, Yoshimasa Kawaguchi, Kakeru Kuroki, Yuna Nakagawa, Toshihiro Masuda, Takayuki Sakai, Kenichi Kawano, Hisaaki Hirose, Miki Imanishi, Tomoka Takatani-Nakase, Sergii Afonin, Anne S. Ulrich, Shiroh Futaki
    Chem. Eur. J. 29(29), e202300129 (2023)
    DOI: 10.1002/chem.202300129

    2022年以前

    • Hemopexin as a Potential Binding Partner of Arginine-rich Cell-penetrating Peptides in Serum
      Kayo Nomura, Kenichi Kawano, Yoshimasa Kawaguchi, Yuki Kawamura, Junya Michibata, Keiko Kuwata, Koji Sugiyama, Kenji Kusumoto, Shiroh Futaki
      ACS Pharmacol. Trans. Sci. 5(8), 603–615 (2022)
      DOI: 10.1021/acsptsci.2c00043
    • Split Luciferase-based Estimation of Cytosolic Cargo Concentration Delivered Intracellularly via Attenuated Cationic Amphiphilic Lytic Peptides
      Syusuke Okano, Yoshimasa Kawaguchi, Kenichi Kawano, Hisaaki Hirose, Miki Imanishi, Shiroh Futaki
      Bioorg. Med. Chem. Lett. 72, 128875 (2022)
      DOI: 10.1016/j.bmcl.2022.128875
    • Stearylated Macropinocytosis-inducing Peptides Facilitating the Cellular Uptake of Small Extracellular Vesicles
      Yuna Nakagawa, Jan Vincent V. Arafiles, Yoshimasa Kawaguchi, Ikuhiko Nakase, Hisaaki Hirose, Shiroh Futaki
      Bioconjug. Chem. 33(5), 869–880 (2022)
      DOI: 10.1021/acs.bioconjchem.2c00113
    • Piezo1 Activation Using Yoda1 Inhibits Macropinocytosis in A431 Human Epidermoid Carcinoma Cells
      Masashi Kuriyama, Hisaaki Hirose, Toshihiro Masuda, Masachika Shudou, Jan Vincent V. Arafiles, Miki Imanishi, Masashi Maekawa, Yuji Hara, Shiroh Futaki
      Sci. Rep. 12, 6322 (2022)
      DOI: 10.1038/s41598-022-10153-8
    • L17ER4: A cell-permeable attenuated cationic amphiphilic lytic peptide
      Kenta Shinga, Takahiro Iwata, Kazuya Murata, Yoko Daitoku, Junya Michibata, Jan Vincent V. Arafiles, Kentarou Sakamoto, Misao Akishiba, Tomoka Takatani-Nakase, Seiya Mizuno, Fumihiro Sugiyama, Miki Imanishi, Shiroh Futaki
      Bioorg. Med. Chem. 61, 116728 (2022)
      DOI: 10.1016/j.bmc.2022.116728
      DOI: 10.1021/acs.joc.1c02139
    • Artificial Nanocage Formed via Self-assembly of β-Annulus Peptide for Delivering Biofunctional Proteins into Cell Interiors
      Kentarou Sakamoto, Hiroto Furukawa, Jan Vincent V. Arafiles, Miki Imanishi, Kazunori Matsuura, Shiroh Futaki
      Bioconjug. Chem. 33(2), 311–320 (2022)
      DOI: 10.1021/acs.bioconjchem.1c00534
    • Grafting Hydrophobic Amino Acids Critical for Inhibition of Protein-Protein Interaction on a Cell-Penetrating Peptide Scaffold
      Yuki Nagano, Jan Vincent V. Arafiles, Keiko Kuwata, Yoshimasa Kawaguchi, Miki Imanishi, Hisaaki Hirose, Shiroh Futaki
      Mol. Pharm. 19(2), 558–567 (2022)
      DOI: 10.1021/acs.molpharmaceut.1c00671
    • Recognition of G-quadruplex RNA by a Crucial RNA Methyltransferase Component, METTL14
      Atsuhiro Yoshida, Takanori Oyoshi, Akiyo Suda, Shiroh Futaki, Miki Imanishi
      Nucleic Acid Res. 50(1), 449–457 (2022)
      DOI: 10.1093/nar/gkab1211
    • Cytosolic Protein Delivery Using pH-Responsive, Charge-Reversible Lipid Nanoparticles
      Yusuke Hirai, Hisaaki Hirose, Miki Imanishi, Tomohiro Asai, Shiroh Futaki
      Sci. Rep. 11(1), 19896 (2021)
      DOI: 10.1038/s41598-021-99180-5
    • Liquid droplet formation and facile cytosolic translocation of IgG in the presence of attenuated cationic amphiphilic lytic peptides
      Takahiro Iwata, Hisaaki Hirose, Kentarou Sakamoto, Yusuke Hirai, Jan Vincent V. Arafiles, Misao Akishiba, Miki Imanishi, Shiroh Futaki
      Angew. Chem. Int. Ed. 60(36), 19804–19812 (2021)
      DOI: 10.1002/anie.202105527
    • Use of Homoarginine to Obtain Attenuated Cationic Membrane Lytic Peptides
      Kentarou Sakamoto, Misao Akishiba, Takahiro Iwata, Jan Vincent V. Arafiles, Miki Imanishi, Shiroh Futaki
      Bioorg. Med. Chem. Lett. 40, 127925 (2021)
      DOI: 10.1016/j.bmcl.2021.127925
    • Discovery of a Macropinocytosis-Inducing Peptide Potentiated by Medium-Mediated Intramolecular Disulfide Formation
      Jan Vincent V. Arafiles, Hisaaki Hirose, Yusuke Hirai, Masashi Kuriyama, Maxwell Mamfe Sakyiamah, Wataru Nomura, Kazuhiro Sonomura, Miki Imanishi, Akira Otaka, Hirokazu Tamamura, Shiroh Futaki
      Angew. Chem. Int. Ed. 60(21), 11928–11936 (2021)
      DOI: 10.1002/anie.202016754
    • Conversion of Cationic Amphiphilic Lytic Peptides to Cell-Penetration Peptides
      Hao-Hsin Yu, Kentarou Sakamoto, Misao Akishiba, Naoki Tamemoto, Hisaaki Hirose, Ikuhiko Nakase, Miki Imanishi, Fatemeh Madani, Astrid Gräslund, Shiroh Futaki
      Pept. Sci. 112(1), e24144 (2020)
      DOI: 10.1002/pep2.24144
    • Programmable RNA Methylation and Demethylation using PUF RNA Binding Proteins
      Kouki Shinoda, Akiyo Suda, Kenko Otonari, Shiroh Futaki, Miki Imanishi
      Chem. Commun. 56(9), 1365–1368 (2020)
      DOI: 10.1039/c9cc09298f
    • Stimulating Macropinocytosis for Intracellular Nucleic Acid and Protein Delivery: A Combined Strategy with Membrane-Lytic Peptides To Facilitate Endosomal Escape
      Jan Vincent V. Arafiles, Hisaaki Hirose, Misao Akishiba, Shogo Tsuji, Miki Imanishi, Shiroh Futaki
      Bioconjug. Chem. 31(3), 547–553 (2020)
      DOI: 10.1021/acs.bioconjchem.0c00064
    • Enhancing the Activity of Membrane Remodeling Epsin-Peptide by Trimerization
      Wei-Yuan Hsu, Toshihiro Masuda, Sergii Afonin, Takayuki Sakai, Jan Vincent V. Arafiles, Kenichi Kawano, Hisaaki Hirose, Miki Imanishi, Anne S. Ulrich, Shiroh Futaki
      Bioorg. Med. Chem. Lett. 30(12), 127190 (2020)
      DOI: 10.1016/j.bmcl.2020.127190
    • Effective RNA Regulation by Combination of Multiple Programmable RNA-Binding
      Misaki Sugimoto, Akiyo Suda, Shiroh Futaki, Miki Imanishi
      Appl. Sci. 10(19), 6803 (2020)
      DOI: 10.3390/app10196803
    • Identification of Synthetic Inhibitors for the DNA Binding of Intrinsically Disordered Circadian Clock Transcription Factors
      Yusuke Hosoya, Wataru Nojo, Isao Kii, Takanori Suzuki, Miki Imanishi, Junko Ohkanda
      Chem. Commun. 56(76), 11203–11206 (2020)
      DOI: 10.1039/d0cc04861e
    • Dipicolylamine/Metal Complexes that Promote Direct Cell-Membrane Penetration of Octaarginine
      Yoshimasa Kawaguchi, Shoko Ise, Yusuke Azuma, Toshihide Takeuchi, Kenichi Kawano, Toan Khanh Le, Junko Ohkanda, Shiroh Futaki
      Bioconjug. Chem. 30(2), 454–460 (2019)
      DOI: 10.1021/acs.bioconjchem.8b00691
    • Loosening of Lipid Packing by Cell Surface Recruitment of Amphiphilic Peptides by Coiled-coil Tethering
      Takayuki Sakai, Kenichi Kawano, Masatomo Iino, Toshihide Takeuchi, Miki Imanishi, Shiroh Futaki
      ChemBioChem 20(16), 2015–2016 (2019)
      DOI: 10.1002/cbic.201900347
    • Modular Redesign of a Cationic Lytic Peptide to Promote the Endosomal Escape of Biomacromolecules
      Yusuke Azuma, Haruka Imai, Yoshimasa Kawaguchi, Ikuhiko Nakase, Hiroshi Kimura, Shiroh Futaki
      Angew. Chem. Int. Ed. 57(39), 12771–12774 (2018)
      DOI: 10.1002/anie.201807534
    • Sequence-specific 5mC Detection in Live Cells Based on the TALE-split Luciferase Complementation System
      Shogo Tsuji, Kouki Shinoda, Shiroh Futaki, Miki Imanishi
      Analyst 143(16), 3793–3797 (2018)
      DOI: 10.1039/c8an00562a
    • Nested PUF Proteins: Extending Target RNA Elements for Gene Regulation
      Kouki Shinoda, Shogo Tsuji, Shiroh Futaki, Miki Imanishi
      ChemBioChem (2018)
      DOI: 10.1002/cbic.201700458
    • Detection of N6-methyladenosine Based on the Methyl-sensitivity of MazF RNA Endonuclease
      Miki Imanishi, Shogo Tsuji, Akiyo Suda, Shiroh Futaki
      Chem. Commun. 53(96), 12930–12933 (2017)
      DOI: 10.1039/c7cc07699a
    • Cytosolic Antibody Delivery by Lipid-sensitive Endosomolytic Peptide
      Misao Akishiba, Toshihide Takeuchi, Yoshimasa Kawaguchi, Kentarou Sakamoto, Hao-Hsin Yu, Ikuhiko Nakase, Tomoka Takatani-Nakase, Fatemeh Madani, Astrid Gräslund, Shiroh Futaki
      Nat. Chem. 9(8), 751–761 (2017)
      DOI: 10.1038/NCHEM.2779

    総説類

    • Macropinocytosis and the Related Actin-Driven Cellular Uptake Pathways for Extracellular Fine Particles
      Siroh Futaki, Hisaaki Hirose, Yoshimasa Kawaguchi
      Extracellular Fine Particles Extracellular Fine Particles (2025)
      DOI: 10.1021/acs.bioconjchem.4c00344

    • Finding ways into the cytosol: Peptide-mediated approaches for delivering proteins into cells
      Yoshimasa Kawaguchi, Shiroh Futaki
      Curr. Opin. Chem. Biol. 81, 102482 (2024)
      DOI: 10.5360/membrane.48.60

    • Modified Nucleobase-Specific Gene Regulation Using Engineered Transcription Activator-Like Effectors
      Shogo Tsuji, Miki Imanishi
      Adv. Drug Deliv. Rev., 147, 59-65 (2019)
      DOI: 10.1016/j.addr.2019.08.011
    • Cellular Uptake of Arginine-Rich Cell-Penetrating Peptides and the Contribution of Membrane-Associated Proteoglycans
      Ikuhiko Nakase, Yoshimasa Kawaguchi, Motoyoshi Nomizu, Shiroh Futaki
      Trends Glycosci. Glycotech., 27(155), 81-88 (2015)
    • New functions of zinc fingers revealed by substitution of conserved residues.
      Imanishi M, Sugiura Y.
      Zinc Fingers: Structure, Properties and Applications (Nova Science Publishers, Inc.), 141-154 (2012)
    • Design of artificial DNA binding proteins toward control and elucidation of cellular functions.
      Imanishi M.
      Yakugaku Zasshi
    • ゲノムを標的にした人工ジンクフィンガータンパク質の創製
      今西未来
      ファルマシア Vol.48, No. 3, 201-205 (2012)
    • マルチ亜鉛フィンガー型人工転写因子の創製と機能
      (Artificial Transcription Factors Based on Multi-Zinc Finger Motifs)
      森崎達也, 今西未来, 二木史朗, 杉浦幸雄
      薬学雑誌, 130(1), 45-48 (2010)
    • New Redesigned Zinc-Finger Proteins: Design Strategy and Its Application
      Shigeru Negi, Miki Imanishi, Makoto Matsumoto, Yukio Sugiura
      Chemistry, 14(11), 3236-3249 (2008)
      PMID: 18236477
    • 遺伝子を標的とした人工亜鉛フィンガータンパク質の創製
      今西未来
      化学工業, 57(9), 667-671 (2006)